QCellPreprocess.h

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/*=========================================================================
 Authors: The GoFigure Dev. Team.
 at Megason Lab, Systems biology, Harvard Medical school, 2009

 Copyright (c) 2009, President and Fellows of Harvard College.
 All rights reserved.

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#ifndef __QCellPreprocess_h
#define __QCellPreprocess_h

#include "vtkSmartPointer.h"
#include "vtkImageData.h"
#include "vtkImageImport.h"
#include "vtkImageExport.h"

#include "itkCellPreprocess.h"
#include "itkVTKImageExport.h"
#include "itkVTKImageImport.h"

#include "ui_CellPreprocess.h"

#include <vnl/vnl_matrix.h>
#include <vnl/vnl_vector.h>
#include <map>
#include <string>

class QCellPreprocess:public QWidget,
  private Ui::CellPreprocessWidget
{
  Q_OBJECT
public:
  typedef itk::Image< unsigned char, 3 >                        InputImageType;
  typedef InputImageType::Pointer                               InputImagePointer;
  typedef itk::CellPreprocess< InputImageType, InputImageType > PreprocessFilterType;
  typedef PreprocessFilterType::Pointer                         PreprocessFilterPointer;
  typedef itk::VTKImageExport< InputImageType >                 ImageExportType;
  typedef ImageExportType::Pointer                              ImageExportPointer;
  typedef itk::VTKImageImport< InputImageType >                 ImageImportType;
  typedef ImageImportType::Pointer                              ImageImportPointer;

  explicit QCellPreprocess(QWidget *iParent = 0);
  virtual ~QCellPreprocess(){}

  void SetMembraneDataType(bool x);

  void SetInput(std::vector< vtkImageData * > & iImg);

  std::vector< vtkImageData * > GetOutput();

signals:
  void Done(std::vector< vtkImageData * > );

protected slots :
  void on_RadiusSpinBox_valueChanged();

  void on_RadiusSlider_sliderReleased();

  void on_GlobalResetButton_clicked();

  void on_GlobalApplyButton_clicked();

  void on_singleChRadioButton_clicked();

  void on_allChRadioButton_clicked();

protected:
  void GetParameters();

  void Preprocess(unsigned int i);

  double m_CellRadius;
  bool m_MembraneData;

  std::vector< vtkImageData * > m_VTKInput;
  std::vector< vtkImageData * > m_VTKOutput;
private:
  QCellPreprocess(const QCellPreprocess &);
  QCellPreprocess operator=(const QCellPreprocess &);
};

#endif