Package: biom
Version: 0.3.8
Date: 2013-04-26
Maintainer: Paul J. McMurdie <mcmurdie@stanford.edu>
License: GPL-2 | file LICENSE
Title: An interface package (beta) for the BIOM file format.
Type: Package
Author: Paul J. McMurdie <mcmurdie@stanford.edu> and
    the biom-format team http://biom-format.org/
BugReports: https://github.com/biom-format/biom-format/issues
URL: http://biom-format.org/,
        https://github.com/biom-format/biom-format
Description: This is an R package for interfacing with the
    BIOM format. Currently in beta form, this package
    includes basic tools for reading biom-format files,
    accessing and subsetting data tables from a biom object
    (which is more complex than a single table),
    as well as limited support for writing a biom-object
    back to a biom-format file. The design of this API is
    intended to match the python API and other tools
    included with the biom-format project, but with a
    decidedly "R flavor" that should be familiar to 
    R users. This includes S4 classes and methods, as well as
    extensions of common core functions/methods.
Imports: plyr (>= 1.8), RJSONIO (>= 1.0.3), Matrix (>= 1.0.12)
Depends: R (>= 3.0.0), methods
Suggests: testthat (>= 0.7.1), knitr (>= 1.1)
VignetteBuilder: knitr (>= 1.1)
Collate: 'allClasses.R' 'allPackage.R' 'IO-methods.R' 'BIOM-class.R'
        'validity-methods.R'
Packaged: 2013-04-26 22:58:36 UTC; joeyMP
