com.pixelmed.convert
Class NIfTI1Header

java.lang.Object
  com.pixelmed.convert.NIfTI1Header

public class NIfTI1Header
extends Object

Field Summary

byte[]	aux_file
boolean	bigEndian
short	bitpix
byte[]	bytes
float	cal_max
float	cal_min
com.pixelmed.convert.NIfTI1Header.DataType	datatype
short	datatype_code
byte[]	description
short[]	dim
byte	dim_info
static int	FIXED_HEADER_LENGTH
com.pixelmed.convert.NIfTI1Header.Intent	intent
short	intent_code
byte[]	intent_name
float	intent_p1
float	intent_p2
float	intent_p3
byte[]	magic
static int	MAGIC_OFFSET
float[]	pixdim
com.pixelmed.convert.NIfTI1Header.CoordinateTransform	qform
short	qform_code
float	qoffset_x
float	qoffset_y
float	qoffset_z
float	quatern_b
float	quatern_c
float	quatern_d
float	scl_inter
float	scl_slope
com.pixelmed.convert.NIfTI1Header.CoordinateTransform	sform
short	sform_code
int	sizeof_hdr
byte	slice_code
float	slice_duration
short	slice_end
com.pixelmed.convert.NIfTI1Header.SliceOrder	slice_order
short	slice_start
float[]	srow_x
float[]	srow_y
float[]	srow_z
float	toffset
float	vox_offset
byte	xyzt_units_code
byte	xyzt_units_code_spatial
byte	xyzt_units_code_temporal
com.pixelmed.convert.NIfTI1Header.Units	xyzt_units_spatial
com.pixelmed.convert.NIfTI1Header.Units	xyzt_units_temporal

Constructor Summary

NIfTI1Header(File inputFile)

Method Summary

static void

main(String[] arg) Read a NIfTI-1 image input format files and dump header.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

FIXED_HEADER_LENGTH

public static final int FIXED_HEADER_LENGTH

See Also:

Constant Field Values

MAGIC_OFFSET

public static final int MAGIC_OFFSET

See Also:

Constant Field Values

bytes

public byte[] bytes

bigEndian

public boolean bigEndian

sizeof_hdr

public int sizeof_hdr

dim_info

public byte dim_info

dim

public short[] dim

intent_p1

public float intent_p1

intent_p2

public float intent_p2

intent_p3

public float intent_p3

intent_code

public short intent_code

intent

public com.pixelmed.convert.NIfTI1Header.Intent intent

datatype_code

public short datatype_code

datatype

public com.pixelmed.convert.NIfTI1Header.DataType datatype

bitpix

public short bitpix

slice_start

public short slice_start

pixdim

public float[] pixdim

vox_offset

public float vox_offset

scl_slope

public float scl_slope

scl_inter

public float scl_inter

slice_end

public short slice_end

slice_code

public byte slice_code

slice_order

public com.pixelmed.convert.NIfTI1Header.SliceOrder slice_order

xyzt_units_code

public byte xyzt_units_code

xyzt_units_code_spatial

public byte xyzt_units_code_spatial

xyzt_units_spatial

public com.pixelmed.convert.NIfTI1Header.Units xyzt_units_spatial

xyzt_units_code_temporal

public byte xyzt_units_code_temporal

xyzt_units_temporal

public com.pixelmed.convert.NIfTI1Header.Units xyzt_units_temporal

cal_max

public float cal_max

cal_min

public float cal_min

slice_duration

public float slice_duration

toffset

public float toffset

description

public byte[] description

aux_file

public byte[] aux_file

qform_code

public short qform_code

qform

public com.pixelmed.convert.NIfTI1Header.CoordinateTransform qform

sform_code

public short sform_code

sform

public com.pixelmed.convert.NIfTI1Header.CoordinateTransform sform

quatern_b

public float quatern_b

quatern_c

public float quatern_c

quatern_d

public float quatern_d

qoffset_x

public float qoffset_x

qoffset_y

public float qoffset_y

qoffset_z

public float qoffset_z

srow_x

public float[] srow_x

srow_y

public float[] srow_y

srow_z

public float[] srow_z

intent_name

public byte[] intent_name

magic

public byte[] magic

Constructor Detail

NIfTI1Header

public NIfTI1Header(File inputFile)
             throws IOException,
                    NIfTI1Exception

Throws:

IOException

NIfTI1Exception

Method Detail

main

public static void main(String[] arg)

Read a NIfTI-1 image input format files and dump header.

Parameters:

arg - the inputFile,