com.pixelmed.anatproc
Class CTAnatomy

java.lang.Object
  com.pixelmed.anatproc.CTAnatomy

public class CTAnatomy
extends Object

This class encapsulates information pertaining to anatomy of CT images.

Utility methods provide for the detection of anatomy from various header attributes regardless of whether these are formal codes, code strings or free text comments.

Field Summary

protected static DisplayableAnatomicConcept[]	anatomicConceptEntries
protected static DictionaryOfConcepts	anatomyConcepts
protected static String[]	badAnatomyWords
protected static String[]	badLateralityOrViewOrAnatomyPhraseTriggers
protected static int	debugLevel

Constructor Summary

CTAnatomy()

Method Summary

static DisplayableConcept	findAmongstGeneralAttributes(AttributeList list, DictionaryOfConcepts concepts, String[] badPhraseTriggers)
static DisplayableAnatomicConcept	findAnatomicConcept(AttributeList list)
static DictionaryOfConcepts	getAnatomyConcepts()
static void	main(String[] arg) Read the DICOM input file and extract anatomical information.
protected static String[]	newStringArray(String... values)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

debugLevel

protected static int debugLevel

badLateralityOrViewOrAnatomyPhraseTriggers

protected static String[] badLateralityOrViewOrAnatomyPhraseTriggers

badAnatomyWords

protected static String[] badAnatomyWords

anatomicConceptEntries

protected static DisplayableAnatomicConcept[] anatomicConceptEntries

anatomyConcepts

protected static DictionaryOfConcepts anatomyConcepts

Constructor Detail

CTAnatomy

public CTAnatomy()

Method Detail

newStringArray

protected static String[] newStringArray(String... values)

getAnatomyConcepts

public static DictionaryOfConcepts getAnatomyConcepts()

findAnatomicConcept

public static DisplayableAnatomicConcept findAnatomicConcept(AttributeList list)

findAmongstGeneralAttributes

public static DisplayableConcept findAmongstGeneralAttributes(AttributeList list,
                                                              DictionaryOfConcepts concepts,
                                                              String[] badPhraseTriggers)

main

public static void main(String[] arg)

Read the DICOM input file and extract anatomical information.

Parameters:

arg - array of one string, the filename to read