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SHOGUN
v1.1.0
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Computes the standard linear kernel on dense char valued features.
Formally, it computes
Note: Basically the same as LinearByteKernel but on signed chars.
Definition at line 29 of file LinearStringKernel.h.

Public Member Functions | |
| CLinearStringKernel () | |
| CLinearStringKernel (CStringFeatures< char > *l, CStringFeatures< char > *r) | |
| virtual | ~CLinearStringKernel () |
| virtual bool | init (CFeatures *l, CFeatures *r) |
| virtual void | cleanup () |
| virtual EKernelType | get_kernel_type () |
| virtual const char * | get_name () const |
| virtual bool | init_optimization (int32_t num_suppvec, int32_t *sv_idx, float64_t *alphas) |
| virtual bool | delete_optimization () |
| virtual float64_t | compute_optimized (int32_t idx) |
| virtual void | clear_normal () |
| virtual void | add_to_normal (int32_t idx, float64_t weight) |
Public Member Functions inherited from CStringKernel< char > | |
| CStringKernel (int32_t cachesize=0) | |
| CStringKernel (CFeatures *l, CFeatures *r) | |
| virtual EFeatureClass | get_feature_class () |
| virtual EFeatureType | get_feature_type () |
Public Member Functions inherited from CKernel | |
| CKernel () | |
| CKernel (int32_t size) | |
| CKernel (CFeatures *l, CFeatures *r, int32_t size) | |
| virtual | ~CKernel () |
| float64_t | kernel (int32_t idx_a, int32_t idx_b) |
| SGMatrix< float64_t > | get_kernel_matrix () |
| virtual SGVector< float64_t > | get_kernel_col (int32_t j) |
| virtual SGVector< float64_t > | get_kernel_row (int32_t i) |
| template<class T > | |
| SGMatrix< T > | get_kernel_matrix () |
| virtual bool | set_normalizer (CKernelNormalizer *normalizer) |
| virtual CKernelNormalizer * | get_normalizer () |
| virtual bool | init_normalizer () |
| void | load (CFile *loader) |
| void | save (CFile *writer) |
| CFeatures * | get_lhs () |
| CFeatures * | get_rhs () |
| virtual int32_t | get_num_vec_lhs () |
| virtual int32_t | get_num_vec_rhs () |
| virtual bool | has_features () |
| bool | get_lhs_equals_rhs () |
| virtual void | remove_lhs_and_rhs () |
| virtual void | remove_lhs () |
| virtual void | remove_rhs () |
| takes all necessary steps if the rhs is removed from kernel | |
| void | set_cache_size (int32_t size) |
| int32_t | get_cache_size () |
| void | list_kernel () |
| bool | has_property (EKernelProperty p) |
| EOptimizationType | get_optimization_type () |
| virtual void | set_optimization_type (EOptimizationType t) |
| bool | get_is_initialized () |
| bool | init_optimization_svm (CSVM *svm) |
| virtual void | compute_batch (int32_t num_vec, int32_t *vec_idx, float64_t *target, int32_t num_suppvec, int32_t *IDX, float64_t *alphas, float64_t factor=1.0) |
| float64_t | get_combined_kernel_weight () |
| void | set_combined_kernel_weight (float64_t nw) |
| virtual int32_t | get_num_subkernels () |
| virtual void | compute_by_subkernel (int32_t vector_idx, float64_t *subkernel_contrib) |
| virtual const float64_t * | get_subkernel_weights (int32_t &num_weights) |
| virtual void | set_subkernel_weights (SGVector< float64_t > weights) |
Public Member Functions inherited from CSGObject | |
| CSGObject () | |
| CSGObject (const CSGObject &orig) | |
| virtual | ~CSGObject () |
| virtual bool | is_generic (EPrimitiveType *generic) const |
| template<class T > | |
| void | set_generic () |
| void | unset_generic () |
| virtual void | print_serializable (const char *prefix="") |
| virtual bool | save_serializable (CSerializableFile *file, const char *prefix="") |
| virtual bool | load_serializable (CSerializableFile *file, const char *prefix="") |
| void | set_global_io (SGIO *io) |
| SGIO * | get_global_io () |
| void | set_global_parallel (Parallel *parallel) |
| Parallel * | get_global_parallel () |
| void | set_global_version (Version *version) |
| Version * | get_global_version () |
| SGVector< char * > | get_modelsel_names () |
| char * | get_modsel_param_descr (const char *param_name) |
| index_t | get_modsel_param_index (const char *param_name) |
Protected Member Functions | |
| virtual float64_t | compute (int32_t idx_a, int32_t idx_b) |
Protected Attributes | |
| float64_t * | normal |
Additional Inherited Members | |
Public Attributes inherited from CSGObject | |
| SGIO * | io |
| Parallel * | parallel |
| Version * | version |
| Parameter * | m_parameters |
| Parameter * | m_model_selection_parameters |
Static Protected Member Functions inherited from CKernel | |
| template<class T > | |
| static void * | get_kernel_matrix_helper (void *p) |
constructor
Definition at line 19 of file LinearStringKernel.cpp.
| CLinearStringKernel | ( | CStringFeatures< char > * | l, |
| CStringFeatures< char > * | r | ||
| ) |
constructor
| l | features of left-hand side |
| r | features of right-hand side |
Definition at line 24 of file LinearStringKernel.cpp.
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virtual |
Definition at line 31 of file LinearStringKernel.cpp.
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virtual |
add to normal
| idx | where to add |
| weight | what to add |
Reimplemented from CKernel.
Definition at line 54 of file LinearStringKernel.cpp.
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virtual |
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virtual |
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protectedvirtual |
compute kernel function for features a and b idx_{a,b} denote the index of the feature vectors in the corresponding feature object
| idx_a | index a |
| idx_b | index b |
Implements CKernel.
Definition at line 66 of file LinearStringKernel.cpp.
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virtual |
compute optimized
| idx | index to compute |
Reimplemented from CKernel.
Definition at line 116 of file LinearStringKernel.cpp.
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virtual |
delete optimization
Reimplemented from CKernel.
Definition at line 108 of file LinearStringKernel.cpp.
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virtual |
return what type of kernel we are
Implements CStringKernel< char >.
Definition at line 60 of file LinearStringKernel.h.
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virtual |
return the kernel's name
Reimplemented from CStringKernel< char >.
Definition at line 69 of file LinearStringKernel.h.
initialize kernel
| l | features of left-hand side |
| r | features of right-hand side |
Reimplemented from CStringKernel< char >.
Definition at line 36 of file LinearStringKernel.cpp.
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virtual |
optimizable kernel, i.e. precompute normal vector and as phi(x) = x do scalar product in input space
| num_suppvec | number of support vectors |
| sv_idx | support vector index |
| alphas | alphas |
Reimplemented from CKernel.
Definition at line 80 of file LinearStringKernel.cpp.
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protected |
normal vector (used in case of optimized kernel)
Definition at line 118 of file LinearStringKernel.h.