debug_stream_alignment.hpp File Reference

The seqan3::debug_stream_type overload in order to print alignments. More...

#include <iomanip>
#include <tuple>
#include <seqan3/alignment/aligned_sequence/aligned_sequence_concept.hpp>
#include <seqan3/alphabet/views/to_char.hpp>
#include <seqan3/core/debug_stream/tuple.hpp>
#include <seqan3/utility/tuple/concept.hpp>
#include <seqan3/utility/views/slice.hpp>
#include <seqan3/utility/views/zip.hpp>

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Namespaces
	seqan3
	The main SeqAn3 namespace.

Functions
template<typename char_t , typename alignment_t >
	seqan3::requires (detail::debug_streamable_tuple< alignment_t > &&detail::all_model_aligned_seq< detail::tuple_type_list_t< std::remove_cvref_t< alignment_t >>>) inline debug_stream_type< char_t > &operator<<(debug_stream_type< char_t > &stream
	Stream operator for alignments, which are represented as tuples of aligned sequences. More...

Variables
alignment_t &&	seqan3::alignment
return	seqan3::stream

Detailed Description

The seqan3::debug_stream_type overload in order to print alignments.

Author

Rene Rahn <rene.rahn AT fu-berlin.de>