Manipulating biological data
============================

.. authors, Gavin Huttley, Kristian Rother, Patrick Yannul

Sequences and Alignments
------------------------

.. toctree::
    :maxdepth: 2

    loading_sequences
    DNA_and_RNA_sequences
    protein_sequences
    alignments
    features
    annotation_db
    moltypes
    alphabet

Genetic code
------------

.. toctree::
    :maxdepth: 1

    what_codes
    genetic_code

Trees
-----

.. toctree::
    :maxdepth: 1

    simple_trees

